Load SIT Model Inputs for Years 1980-1999

Source: R/load_baseline_data.R

returns list of data values used by model

load_baseline_data(species)

Arguments

species

Call function with one of the following options to load species specific model inputs: 'fall', 'winter', 'spring', 'steelhead'

Value

list of model inputs

Details

The list returned contains the following data:

  • p.tempMC20 = Proportion of days in month exceeding 20°C

  • p.diver = Proportion of flow diverted for each watershed

  • t.diver = Total flow diverted for each watershed

  • dlt.divers = Proportion of flow diverted in the North and South deltas

  • dlt.divers.tot = Total flow diverted in the North and South deltas

  • juv.tmp = Monthly mean temperature during juvenile outmigration in each watershed

  • juv.tmp.dlt = Monthly mean temperature during juvenile outmigration in the deltas

  • Dlt.inf = Total inflow in the deltas

  • DLThab = Habitat areas for the deltas

  • prop.Q.bypasses = Proportion of Sacramento River into bypasses

  • IChab.bypass = Instream habitat areas for each bypass

  • floodp.bypass = Floodplain habitat areas for each bypass

  • fp.weeks = Floodplain habitat duration inundated for each watershed

  • gate.top = Monthly record of bypasses overtopped

  • DegDay = Accumulated degree days for adults before spawning

  • retQ = Proportion of flows at tributary junction from natal watershed in October

  • upSacQ = Upper Sacramento flow

  • freeportQ = Flow at Georgiana slough

  • dlt.gates = Total and proportion number of days the cross channel gates are typically closed per month

  • egg.tmp.eff = Temperature effect on egg mortality

  • inps = Miscellaneous model inputs

  • Dlt.inp = Miscellaneous delta model inputs

  • prop.pulse = Proportion pulse flows

  • medQ = Monthly median flows

Fall Run Specific Outputs:

  • IChab.spawn = Spawning habitat areas for each watershed

  • IChab.fry = Fry instream habitat areas for each watershed

  • IChab.juv = Juvenile instream habitat areas for each watershed

  • floodP = Floodplain habitat areas for each watershed

Spring Run Specific Outputs:

  • IChab.spawn = Spawning habitat areas for each watershed

  • IChab.fry = Fry instream habitat areas for each watershed

  • IChab.juv = Juvenile instream habitat areas for each watershed

  • floodP = Floodplain habitat areas for each watershed

  • SR.pools = Holding Habitat

  • has.SR = Spring Run are present in watershed

Steelhead Specific Outputs:

  • IChab.spawn = Spawning habitat areas for each watershed

  • IChab.fry = Fry instream habitat areas for each watershed

  • IChab.juv = Juvenile instream habitat areas for each watershed

  • floodP = Floodplain habitat areas for each watershed

  • ST.pools = Holding Habitat

  • IChab.adult = Adult instream habitat areas for each watershed

  • meanQ = Monthly mean flow for each watershed

Winter Run Specific Outputs:

  • IChab.spawn = Spawning habitat areas for each Sacramento River segment

  • IChab.fry = Fry instream habitat areas for each Sacramento River segment

  • IChab.juv = Juvenile instream habitat areas for each Sacramento River segment

  • floodP = Floodplain habitat areas for each Sacramento River segment

Examples

# place these two lines within the SIT Salmon Population Model function to load the data
all_inputs <- cvpiaData::load_baseline_data('fall')
list2env(all_inputs, envir = environment())
#> <environment: 0x555f3e5708a8>